Publications

Research papers published with the support of the centre funding:

2019

David Kaftan, David Bína, Michal Koblížek (2019) Temperature dependence of photosynthetic reaction centre activity in Rhodospirillum rubrum. Photosynthesis Research. https://doi.org/10.1007/s11120-019-00652-7
, , , , , Tissue-specific signatures in tick cell line MS profiles. Parasites & Vectors 12(1): 212. DOI: 10.1186/s13071-019-3460-5

Vadym Prysiazhnyi, Filip Dycka, Jiri Kratochvil, Vitezslav Stranak, Petra Ksirova, Zdenek Hubicka (2019) Silver nanoparticles for solvent-free detection of small molecules and mass-to-charge calibration of laser desorption/ionization mass spectrometry. Journal of Vacuum Science & Technology B 37(1). DOI: 10.1116/1.5050878


Volha Shmidt, David Kaftan, Avigdor Scherz, Avihai Danon (2019) Targeting mutations to the plastidial psbA gene of Chlamydomonas reinhardtii without direct positive selection. Scientific Reports 9: 7367, https://doi.org/10.1038/s41598-019-42617-9

Noelia Jaime-Pérez, David Kaftan, David Bína, Syed Nadeem Hussain Bokharia, Hendrik Küpper (2019) Mechanisms of sublethal copper toxicity damage to the photosynthetic apparatus of Rhodospirillum rubrum. Biochimica et Biophysica Acta – Bioenergetics 1860 (8): 640-650. https://doi.org/10.1016/j.bbabio.2019.06.004

David Kaftan
(2019) Molecular docking of the TNF-derived TIP peptide to a ASIC1a-based model of the alpha subunit of the epithelial sodium channel (ENaC). In Cytokine-Ion Channel Interactions in Pulmonary Inflammation (Vadász et Lucas eds.). Lausanne: Frontiers Media. pp. 1,5. doi: 10.3389/978-2-88945-703-8


Robin A Corey, Zainab Ahdash, Anokhi Shah, Euan Pyle, William John Allen, Tomas Fessl, Janet E Lovett, Argyris Politis, Ian Collinson (2019). ATP-induced asymmetric pre-protein folding as a driver of protein translocation through the Sec machinery. eLife, 2019-01-02 DOI: 10.7554/eLife.41803

Kateřina Osterrothová, Adam Culka, Kateřina Němečková, David Kaftan, Linda Nedbalová, Lenka Procházková, Jan Jehlička (2019) Analyzing carotenoids of snow algae by Raman microspectroscopy and high-performance liquid chromatography. Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy 212: 262-271. https://doi.org/10.1016/j.saa.2019.01.013

David Kaftan, Hana Medová, Vadim Selyanin, Karel Kopejtka, Michal Koblížek (2019) Extended temperature optimum of photosynthetic reaction centers in Rhodobacterales. Photosynthetica 57(2): 361-366. DOI 10.32615/ps.2019.039

Otakar Strunecký, Karel Kopejtka, Franz Goecke, Juergen Tomasch, Jaromír Lukavský, Amir Neori, Silke Kahl, Dietmar H Pieper, Plamen Pilarski, David Kaftan, Michal Koblížek (2019) High diversity of thermophilic cyanobacteria in Rupite hot-spring identified by microscopy, cultivation, single-cell PCR and amplicon sequencing. Extremophiles 23: 35-48. DOI: 10.1007/s00792-018-1058-z

2018
Marek Polášek, Roman J. Godunko, Sereina Rutschmann, Marek Svitok,Milan Novikmec & Světlana Zahrádková (2018). Integrative taxonomy of genus Electrogena (Ephemeroptera: Heptageniidae): the role of innovative morphological analyses for species delimitation. Anthrop. Syst. Phylogeny 76, 449-462.  

Streckaite S., Gardian Z., Li F., Pascal A.A., Litvin R., Robert B., Llansola-Portoles M.J. (2018) Pigment configuration in the light-harvesting protein of the xanthophyte alga Xanthonema debile. Photosynth Res. Jul 13. doi: 10.1007/s11120-018-0557-1

Martin Kornan, Marek Svitok (2018) Pairwise null model analyses of temporal patterns of birdassemblages contradict the assumptions of competition theory. Basic and Applied Ecology https://doi.org/10.1016/j.baae.2018.07.001

Juraj Litavský, Slavomír Stašiov, Marek Svitok, Eva Michalková, Oto Majzlan, Hubert Žarnovičan, Peter Fedor (2018) Epigean communities of harvestmen (Opiliones) in Pannonian Basin floodplain forests: an interaction with environmental parameters. Biologia https://doi.org/10.2478/s11756-018-0084-8

Lucia Sochuliakova, Elwira Sienkiewicz, Ladislav Hamerlík, Marek Svitok, Dana Fidlerová, Peter Bitušík (2018) Reconstructing the Trophic History of an Alpine Lake (High Tatra Mts.) Using Subfossil Diatoms: Disentangling the Effects of Climate and Human Influence. WAter Air Soil Pollut 229:289.

Marek Svitok
, Milan Novikmec, Ladislav Hamerlík, Judita Kochjarová, Helena Oťaheľová, Peter Paľove-Balang, Dušan Senko, Zuzana Matúšová, Kateřina Bubíková, Richard Hrivnák (2018) Test of the efficiency of  environmental surrogates for the conservation prioritization of ponds based on macrophytes. Ecological Indicators 95, 606-614. 

Vladimír Viciana, Marek Svitok, Eva Michalková, Ivan Lukáčik, Slavomír Stašiov (2018) Influence of tree species and soil properties on ground beetle (Coleoptera:Carabidae) communities. Acta Oecologica 91, 120-126.

 

Daniel Kozák | Martin Mikoláš | Marek Svitok | Radek Bače | Yoan Paillet | Laurent Larrieu | Thomas A. Nagel | Krešimir Begovič | Vojtěch Čada | Abdulla Diku | Michal Frankovič | Pavel Janda | Ondrej Kameniar | Srđan Keren | Peter Kjučukov | Jana Lábusová | Thomas Langbehn | Jakub Málek | Stjepan Mikac | Robert C. Morrissey | Markéta H. Nováková | Jonathan S. Schurrman | Kristýna Svobodová | Michal Synek | Marius Teodosiu | Elvin Toromani | Volodymyr Trotsiuk | Lucie Vítková | Miroslav Svoboda (2018) Profile of tree-related microhabitats in European primary beech-dominated forests. Forest Ecology and Management online.

Ilektra-Chara Giassa, Jan Rynes, Tomas Fessl, Silvie Foldynova-Trantirkova, Lukas Trantirek (2018) Advances in the cellular structural biology of nucleic acids, FEBS Letters, accepted,
 

Jack P.K. Bravo, Alexander Borodavka, Anders Barth, Antonio N Calabrese, Peter Mojzes, Joseph J.B. Cockburn, Don C Lamb, Roman Tuma (2018) Stability of local secondary structure determines selectivity of viral RNA chaperones. Nucl. Acids Res. 


Tomas FesslDaniel WatkinsPeter OatleyWilliam John AllenRobin A CoreyJim HorneStephen A BaldwinSheena E RadfordIan CollinsonRoman Tuma (2018). Dynamic action of the Sec machinery during initiation, protein translocation and termination revealed by single molecule fluorescence. eLife 


Zannottia M.; Giovannettia R.; Minofar B.; Řeha D.; Plačková L.; D’Amatoa 
C.A.; Rommozzia E. Dudko H.V.; Karia N.; Minicucci M. (2018) Aggregation and metal-complexation behaviour of THPP porphyrin in ethanol/water solutions as function of pH. Spectrochim. Acta A, 193, 235-248. doi: https://doi.org/10.1016/j.saa.2017.12.021

2017

Dachev, M., Bína, D., Sobotka, R., Moravcová, L., Gardian, Z., Kaftan, D., Šlouf, V., Fuciman, M., Polívka, T. & Koblížek, M. (2017) Unique double concentric ring organization of light harvesting complexes in Gemmatimonas phototrophica. PLoS Biology 15(12): e2003943. https://doi.org/10.1371/journal.pbio.2003943

Dzatko, S., Krafcikova, M., Hänsel-Hertsch, R., Fessl, T., Fiala, R., Loja, T., Krafcik, D., Mergny, J.-L., Foldynova-Trantirkova, S. and Trantirek, L. (2017) Evaluation of stability of DNA i-motifs in the nuclei of living mammalian cells. Angew. Chem. Accepted Author Manuscript. doi:10.1002/ange.201712284